Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC024243.1-201ENST00000609234 778 ntBASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.67■□□□□ 0.42
ARHGEF39Q8N4T4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 SPDYE15P-201ENST00000424157 909 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 HOMER2P1-201ENST00000455653 964 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 NTF6B-201ENST00000591913 560 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 HYMAI.1-201ENST00000620949 238 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 CROCCP3-202ENST00000420820 1947 ntBASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARHGEF39Q8N4T4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 KRT18P23-201ENST00000435622 1283 ntBASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 BX323043.1-201ENST00000641006 1765 ntBASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARHGEF39Q8N4T4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.64■□□□□ 0.42
ARHGEF39Q8N4T4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ARHGEF39Q8N4T4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ARHGEF39Q8N4T4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
ARHGEF39Q8N4T4 KRT8P50-201ENST00000562022 1438 ntBASIC17.64■□□□□ 0.42
ARHGEF39Q8N4T4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ARHGEF39Q8N4T4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.64■□□□□ 0.41
ARHGEF39Q8N4T4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms