Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 AL645929.1-201ENST00000420084 975 ntBASIC29.22■■■□□ 2.27
VPS8Q8N3P4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
VPS8Q8N3P4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 PCED1CP-201ENST00000419887 785 ntBASIC29.21■■■□□ 2.27
VPS8Q8N3P4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
VPS8Q8N3P4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
VPS8Q8N3P4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.2■■■□□ 2.26
VPS8Q8N3P4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
VPS8Q8N3P4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 IER3-202ENST00000376377 1350 ntBASIC29.18■■■□□ 2.26
VPS8Q8N3P4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
VPS8Q8N3P4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
VPS8Q8N3P4 AC091076.1-201ENST00000610741 619 ntBASIC29.17■■■□□ 2.26
VPS8Q8N3P4 AL163051.1-201ENST00000569214 1512 ntBASIC29.17■■■□□ 2.26
VPS8Q8N3P4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 BX323043.1-201ENST00000641006 1765 ntBASIC29.16■■■□□ 2.26
VPS8Q8N3P4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
VPS8Q8N3P4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC29.15■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms