Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF28Q8N1W1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 AC024563.2-201ENST00000603282 481 ntBASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 EMBP1-201ENST00000458200 901 ntBASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF28Q8N1W1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 AC004870.1-201ENST00000315132 882 ntBASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 AC104819.1-201ENST00000504587 486 ntBASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
ARHGEF28Q8N1W1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 FDX1P1-201ENST00000449115 551 ntBASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 KRT17P6-201ENST00000453795 1220 ntBASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 AP000867.3-201ENST00000524675 377 ntBASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF28Q8N1W1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
ARHGEF28Q8N1W1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ARHGEF28Q8N1W1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AC009065.1-201ENST00000564055 1225 ntBASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AKR1C7P-201ENST00000305623 895 ntBASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 HES2-202ENST00000377836 507 ntTSL 2 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AC005336.2-201ENST00000593183 939 ntBASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ARHGEF28Q8N1W1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF28Q8N1W1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 AC083906.6-201ENST00000641366 219 ntBASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
ARHGEF28Q8N1W1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms