Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 MIR4674-201ENST00000582457 87 ntBASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 AC024243.1-201ENST00000609234 778 ntBASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 AL391807.1-203ENST00000604392 2365 ntBASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RP1L1Q8IWN7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 MIR574-201ENST00000385209 96 ntBASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AC104819.1-201ENST00000504587 486 ntBASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 KRT8P26-201ENST00000534154 1276 ntBASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AL590627.1-203ENST00000421194 1026 ntBASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AC092865.5-201ENST00000545435 363 ntBASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AC074051.2-201ENST00000565115 352 ntBASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RP1L1Q8IWN7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RP1L1Q8IWN7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 FAM220CP-201ENST00000395253 831 ntBASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RP1L1Q8IWN7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms