Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC50Q8IVM0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC50Q8IVM0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC50Q8IVM0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC50Q8IVM0 OR6D1P-202ENST00000641007 5290 ntBASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 AC124016.1-201ENST00000609552 612 ntBASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC50Q8IVM0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC50Q8IVM0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 Z85996.1-201ENST00000494644 937 ntBASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms