Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS4Q8IUM7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 GUSBP12-201ENST00000513727 720 ntBASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 AC099336.1-202ENST00000602961 463 ntBASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 AL592071.1-201ENST00000611956 408 ntBASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 AC068587.9-201ENST00000641814 219 ntBASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 AC141586.3-201ENST00000562166 1838 ntBASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS4Q8IUM7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
NPAS4Q8IUM7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS4Q8IUM7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS4Q8IUM7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 KRT89P-201ENST00000620027 1478 ntBASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.01■□□□□ 0.79
NPAS4Q8IUM7 IGHV3-47-201ENST00000425060 335 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms