Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 MTDHP3-201ENST00000594186 672 ntBASIC23.46■■□□□ 1.35
COL23A1Q86Y22 AC034236.2-201ENST00000606662 1610 ntBASIC23.46■■□□□ 1.35
COL23A1Q86Y22 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL23A1Q86Y22 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
COL23A1Q86Y22 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.45■■□□□ 1.35
COL23A1Q86Y22 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.45■■□□□ 1.34
COL23A1Q86Y22 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 AC112482.1-201ENST00000492080 688 ntBASIC23.45■■□□□ 1.34
COL23A1Q86Y22 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 FAM197Y3-203ENST00000618346 717 ntBASIC23.45■■□□□ 1.34
COL23A1Q86Y22 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.45■■□□□ 1.34
COL23A1Q86Y22 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.44■■□□□ 1.34
COL23A1Q86Y22 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 AC034105.1-201ENST00000563488 319 ntBASIC23.44■■□□□ 1.34
COL23A1Q86Y22 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.44■■□□□ 1.34
COL23A1Q86Y22 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 MED15P5-201ENST00000423150 992 ntBASIC23.43■■□□□ 1.34
COL23A1Q86Y22 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.43■■□□□ 1.34
COL23A1Q86Y22 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.43■■□□□ 1.34
COL23A1Q86Y22 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL23A1Q86Y22 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL23A1Q86Y22 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms