Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 AC133681.1-201ENST00000465482 601 ntBASIC16.66■□□□□ 0.26
LRRC28Q86X40 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 AL023875.1-201ENST00000640777 796 ntBASIC16.66■□□□□ 0.26
LRRC28Q86X40 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 AL121906.2-201ENST00000621597 723 ntBASIC16.65■□□□□ 0.26
LRRC28Q86X40 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 AC124283.5-201ENST00000624661 1809 ntBASIC16.65■□□□□ 0.26
LRRC28Q86X40 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC28Q86X40 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 AC008764.6-201ENST00000595909 2069 ntBASIC16.65■□□□□ 0.26
LRRC28Q86X40 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC28Q86X40 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRRC28Q86X40 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 AC124016.1-201ENST00000609552 612 ntBASIC16.64■□□□□ 0.25
LRRC28Q86X40 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC28Q86X40 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC28Q86X40 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms