Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.91■■□□□ 1.26
USP48Q86UV5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.91■■□□□ 1.26
USP48Q86UV5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
USP48Q86UV5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.91■■□□□ 1.26
USP48Q86UV5 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.91■■□□□ 1.26
USP48Q86UV5 AC092597.1-201ENST00000487352 616 ntBASIC22.91■■□□□ 1.26
USP48Q86UV5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.91■■□□□ 1.26
USP48Q86UV5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.91■■□□□ 1.26
USP48Q86UV5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.91■■□□□ 1.26
USP48Q86UV5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
USP48Q86UV5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
USP48Q86UV5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.91■■□□□ 1.26
USP48Q86UV5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
USP48Q86UV5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.91■■□□□ 1.26
USP48Q86UV5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.9■■□□□ 1.26
USP48Q86UV5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.9■■□□□ 1.26
USP48Q86UV5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.9■■□□□ 1.26
USP48Q86UV5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 FAAHP1-202ENST00000446499 1238 ntBASIC22.9■■□□□ 1.26
USP48Q86UV5 TSSC2-201ENST00000450217 709 ntBASIC22.9■■□□□ 1.26
USP48Q86UV5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.9■■□□□ 1.26
USP48Q86UV5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 MIR3180-1-201ENST00000580374 94 ntBASIC22.9■■□□□ 1.26
USP48Q86UV5 MIR3180-3-201ENST00000584616 94 ntBASIC22.9■■□□□ 1.26
USP48Q86UV5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.9■■□□□ 1.26
USP48Q86UV5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.9■■□□□ 1.26
USP48Q86UV5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
USP48Q86UV5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
USP48Q86UV5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.89■■□□□ 1.26
USP48Q86UV5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
USP48Q86UV5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.89■■□□□ 1.25
USP48Q86UV5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.89■■□□□ 1.25
USP48Q86UV5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.89■■□□□ 1.25
USP48Q86UV5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.89■■□□□ 1.25
USP48Q86UV5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.89■■□□□ 1.25
USP48Q86UV5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
USP48Q86UV5 AC006538.3-201ENST00000612495 578 ntBASIC22.89■■□□□ 1.25
USP48Q86UV5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.89■■□□□ 1.25
USP48Q86UV5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
USP48Q86UV5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
USP48Q86UV5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.89■■□□□ 1.25
USP48Q86UV5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 AL032819.2-201ENST00000624543 2162 ntBASIC22.89■■□□□ 1.25
USP48Q86UV5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
USP48Q86UV5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
USP48Q86UV5 AC016734.2-201ENST00000624325 1377 ntBASIC22.89■■□□□ 1.25
USP48Q86UV5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.88■■□□□ 1.25
USP48Q86UV5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.88■■□□□ 1.25
USP48Q86UV5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.88■■□□□ 1.25
USP48Q86UV5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
USP48Q86UV5 AC009078.2-202ENST00000463353 338 ntBASIC22.88■■□□□ 1.25
USP48Q86UV5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
USP48Q86UV5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.88■■□□□ 1.25
USP48Q86UV5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.88■■□□□ 1.25
USP48Q86UV5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP48Q86UV5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
USP48Q86UV5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.87■■□□□ 1.25
USP48Q86UV5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP48Q86UV5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
USP48Q86UV5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.87■■□□□ 1.25
USP48Q86UV5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP48Q86UV5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP48Q86UV5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP48Q86UV5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.87■■□□□ 1.25
USP48Q86UV5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.87■■□□□ 1.25
USP48Q86UV5 AC023511.2-201ENST00000618803 211 ntBASIC22.87■■□□□ 1.25
USP48Q86UV5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
USP48Q86UV5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms