Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.7■□□□□ 0.58
LDB1Q86U70 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB1Q86U70 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.7■□□□□ 0.58
LDB1Q86U70 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.7■□□□□ 0.58
LDB1Q86U70 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LDB1Q86U70 AC079598.2-202ENST00000546624 1451 ntBASIC18.7■□□□□ 0.58
LDB1Q86U70 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 AC007613.1-201ENST00000572811 2597 ntBASIC18.7■□□□□ 0.58
LDB1Q86U70 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB1Q86U70 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB1Q86U70 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LDB1Q86U70 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.69■□□□□ 0.58
LDB1Q86U70 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.69■□□□□ 0.58
LDB1Q86U70 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LDB1Q86U70 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.69■□□□□ 0.58
LDB1Q86U70 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB1Q86U70 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB1Q86U70 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.69■□□□□ 0.58
LDB1Q86U70 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB1Q86U70 AP000525.1-201ENST00000608286 694 ntBASIC18.69■□□□□ 0.58
LDB1Q86U70 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LDB1Q86U70 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB1Q86U70 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 AL357033.4-201ENST00000617703 1807 ntBASIC18.69■□□□□ 0.58
LDB1Q86U70 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LDB1Q86U70 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB1Q86U70 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
LDB1Q86U70 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.68■□□□□ 0.58
LDB1Q86U70 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.68■□□□□ 0.58
LDB1Q86U70 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.68■□□□□ 0.58
LDB1Q86U70 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LDB1Q86U70 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LDB1Q86U70 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.68■□□□□ 0.58
LDB1Q86U70 AL355075.4-201ENST00000554988 638 ntBASIC18.68■□□□□ 0.58
LDB1Q86U70 MIR4785-201ENST00000585005 73 ntBASIC18.68■□□□□ 0.58
LDB1Q86U70 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.68■□□□□ 0.58
LDB1Q86U70 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
LDB1Q86U70 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB1Q86U70 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.68■□□□□ 0.58
LDB1Q86U70 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.68■□□□□ 0.58
LDB1Q86U70 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.68■□□□□ 0.58
LDB1Q86U70 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LDB1Q86U70 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.68■□□□□ 0.58
LDB1Q86U70 AC008556.1-201ENST00000610908 2040 ntBASIC18.67■□□□□ 0.58
LDB1Q86U70 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.67■□□□□ 0.58
LDB1Q86U70 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.67■□□□□ 0.58
LDB1Q86U70 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.67■□□□□ 0.58
LDB1Q86U70 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LDB1Q86U70 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LDB1Q86U70 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.67■□□□□ 0.58
LDB1Q86U70 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LDB1Q86U70 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.67■□□□□ 0.58
LDB1Q86U70 AC090164.3-201ENST00000610780 2143 ntBASIC18.67■□□□□ 0.58
LDB1Q86U70 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms