Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC004980.1-204ENST00000429707 299 ntBASIC12.38□□□□□ -0.43
SCXQ7RTU7 AL137013.1-201ENST00000432946 1228 ntBASIC12.38□□□□□ -0.43
SCXQ7RTU7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AL445228.2-201ENST00000605589 952 ntBASIC12.38□□□□□ -0.43
SCXQ7RTU7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AC131212.4-201ENST00000623606 975 ntBASIC12.38□□□□□ -0.43
SCXQ7RTU7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 SLC25A3P1-201ENST00000443844 931 ntBASIC12.37□□□□□ -0.43
SCXQ7RTU7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 C2orf69P3-201ENST00000565542 1120 ntBASIC12.37□□□□□ -0.43
SCXQ7RTU7 AL049597.2-201ENST00000565575 961 ntBASIC12.37□□□□□ -0.43
SCXQ7RTU7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SCXQ7RTU7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCXQ7RTU7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 AC093503.3-201ENST00000624917 2352 ntBASIC12.36□□□□□ -0.43
SCXQ7RTU7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 TERF1P1-201ENST00000311003 1181 ntBASIC12.36□□□□□ -0.43
SCXQ7RTU7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 AC011506.1-201ENST00000474329 610 ntBASIC12.36□□□□□ -0.43
SCXQ7RTU7 KRT18P35-201ENST00000510488 1269 ntBASIC12.36□□□□□ -0.43
SCXQ7RTU7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.36□□□□□ -0.43
SCXQ7RTU7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCXQ7RTU7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms