Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 AC141586.3-201ENST00000562166 1838 ntBASIC17.54■□□□□ 0.4
RTL4Q6ZR62 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTL4Q6ZR62 SDHAP1-207ENST00000440850 2000 ntBASIC17.54■□□□□ 0.4
RTL4Q6ZR62 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 RCN1P1-201ENST00000400413 996 ntBASIC17.53■□□□□ 0.4
RTL4Q6ZR62 AL137013.1-201ENST00000432946 1228 ntBASIC17.53■□□□□ 0.4
RTL4Q6ZR62 TSPY17P-201ENST00000450329 467 ntBASIC17.53■□□□□ 0.4
RTL4Q6ZR62 ECEL1P2-202ENST00000465689 757 ntBASIC17.53■□□□□ 0.4
RTL4Q6ZR62 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTL4Q6ZR62 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 AC092865.7-201ENST00000641832 219 ntBASIC17.52■□□□□ 0.4
RTL4Q6ZR62 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.52■□□□□ 0.4
RTL4Q6ZR62 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
RTL4Q6ZR62 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 AC005082.1-201ENST00000413042 2259 ntBASIC17.51■□□□□ 0.39
RTL4Q6ZR62 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTL4Q6ZR62 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms