Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCRAQ6ISU1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCRAQ6ISU1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 KRT89P-201ENST00000620027 1478 ntBASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 RCN1P2-201ENST00000398357 915 ntBASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 DNAJB3-202ENST00000449667 1266 ntBASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 AC079416.2-201ENST00000625035 1193 ntBASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCRAQ6ISU1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 AL512353.2-201ENST00000448759 1962 ntBASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 AC092910.1-201ENST00000482027 1129 ntBASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 Z83851.2-201ENST00000609564 659 ntBASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.23■□□□□ 0.67
PTCRAQ6ISU1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 HLA-J-201ENST00000462773 1622 ntBASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms