Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 REXO1L9P-201ENST00000604264 2108 ntBASIC17.66■□□□□ 0.42
LPCAT4Q643R3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 AC004854.2-201ENST00000608450 1441 ntBASIC17.65■□□□□ 0.42
LPCAT4Q643R3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 AC046158.3-201ENST00000624947 2558 ntBASIC17.65■□□□□ 0.42
LPCAT4Q643R3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 TERF1P5-201ENST00000477545 1207 ntBASIC17.65■□□□□ 0.42
LPCAT4Q643R3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 SUDS3P1-201ENST00000505831 966 ntBASIC17.65■□□□□ 0.42
LPCAT4Q643R3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LPCAT4Q643R3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LPCAT4Q643R3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.64■□□□□ 0.42
LPCAT4Q643R3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
LPCAT4Q643R3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 AC142381.2-201ENST00000566120 298 ntBASIC17.64■□□□□ 0.41
LPCAT4Q643R3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LPCAT4Q643R3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 AL162412.1-201ENST00000567129 965 ntBASIC17.63■□□□□ 0.41
LPCAT4Q643R3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 AC100791.3-201ENST00000617619 330 ntBASIC17.63■□□□□ 0.41
LPCAT4Q643R3 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms