Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RC3H1Q5TC82 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 IRX1P1-201ENST00000438849 1838 ntBASIC23.54■■□□□ 1.36
RC3H1Q5TC82 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 RNPS1P1-201ENST00000507437 918 ntBASIC23.54■■□□□ 1.36
RC3H1Q5TC82 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 KRT18P58-201ENST00000527480 1120 ntBASIC23.54■■□□□ 1.36
RC3H1Q5TC82 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 AC148477.8-201ENST00000624298 468 ntBASIC23.54■■□□□ 1.36
RC3H1Q5TC82 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H1Q5TC82 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 AL137060.1-201ENST00000618151 2648 ntBASIC23.53■■□□□ 1.36
RC3H1Q5TC82 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 AC106730.1-201ENST00000566722 1090 ntBASIC23.53■■□□□ 1.36
RC3H1Q5TC82 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.53■■□□□ 1.36
RC3H1Q5TC82 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H1Q5TC82 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 AF186996.4-201ENST00000467186 377 ntBASIC23.52■■□□□ 1.36
RC3H1Q5TC82 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 AC114341.1-201ENST00000618070 349 ntBASIC23.52■■□□□ 1.36
RC3H1Q5TC82 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H1Q5TC82 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 KRT8P50-201ENST00000562022 1438 ntBASIC23.51■■□□□ 1.35
RC3H1Q5TC82 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 AC018712.1-201ENST00000455767 687 ntBASIC23.51■■□□□ 1.35
RC3H1Q5TC82 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.51■■□□□ 1.35
RC3H1Q5TC82 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.5■■□□□ 1.35
RC3H1Q5TC82 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.5■■□□□ 1.35
RC3H1Q5TC82 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 FP475955.4-201ENST00000623131 1990 ntBASIC23.5■■□□□ 1.35
RC3H1Q5TC82 AC243591.1-201ENST00000452967 1364 ntBASIC23.5■■□□□ 1.35
RC3H1Q5TC82 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H1Q5TC82 Z98044.1-201ENST00000632503 1764 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms