Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
HMGXB3Q12766 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
HMGXB3Q12766 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
HMGXB3Q12766 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
HMGXB3Q12766 DNAJB3-201ENST00000446806 729 ntBASIC32.92■■■□□ 2.86
HMGXB3Q12766 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC32.92■■■□□ 2.86
HMGXB3Q12766 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC32.92■■■□□ 2.86
HMGXB3Q12766 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HMGXB3Q12766 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HMGXB3Q12766 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC32.91■■■□□ 2.86
HMGXB3Q12766 MED16-201ENST00000269814 1199 ntTSL 5 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 TP73-202ENST00000354437 2140 ntTSL 5 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HMGXB3Q12766 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 AP006288.1-201ENST00000446065 395 ntBASIC32.91■■■□□ 2.86
HMGXB3Q12766 DHDH-204ENST00000523250 634 ntTSL 5 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 SART3-203ENST00000546611 1184 ntBASIC32.91■■■□□ 2.86
HMGXB3Q12766 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC32.91■■■□□ 2.86
HMGXB3Q12766 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
HMGXB3Q12766 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
HMGXB3Q12766 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
HMGXB3Q12766 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC32.9■■■□□ 2.86
HMGXB3Q12766 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
HMGXB3Q12766 RCN1P2-201ENST00000398357 915 ntBASIC32.9■■■□□ 2.86
HMGXB3Q12766 MTDHP3-201ENST00000594186 672 ntBASIC32.9■■■□□ 2.86
HMGXB3Q12766 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HMGXB3Q12766 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HMGXB3Q12766 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
HMGXB3Q12766 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HMGXB3Q12766 MEG3-211ENST00000452514 461 ntTSL 3 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HMGXB3Q12766 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
HMGXB3Q12766 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 AL138831.2-201ENST00000606564 490 ntBASIC32.88■■■□□ 2.85
HMGXB3Q12766 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC32.88■■■□□ 2.85
HMGXB3Q12766 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
HMGXB3Q12766 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
HMGXB3Q12766 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 PNMT-203ENST00000581428 677 ntTSL 2 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 AC025062.2-201ENST00000605477 670 ntBASIC32.87■■■□□ 2.85
HMGXB3Q12766 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
HMGXB3Q12766 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
HMGXB3Q12766 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
HMGXB3Q12766 TP73-AS1-210ENST00000637775 1455 ntBASIC32.87■■■□□ 2.85
HMGXB3Q12766 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC32.87■■■□□ 2.85
HMGXB3Q12766 INTS4P1-201ENST00000438455 1935 ntBASIC32.87■■■□□ 2.85
HMGXB3Q12766 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
HMGXB3Q12766 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
HMGXB3Q12766 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
HMGXB3Q12766 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
HMGXB3Q12766 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
HMGXB3Q12766 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
HMGXB3Q12766 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
HMGXB3Q12766 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
HMGXB3Q12766 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC32.86■■■□□ 2.85
HMGXB3Q12766 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC32.86■■■□□ 2.85
HMGXB3Q12766 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC32.86■■■□□ 2.85
HMGXB3Q12766 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC32.85■■■□□ 2.85
HMGXB3Q12766 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC32.85■■■□□ 2.85
HMGXB3Q12766 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
HMGXB3Q12766 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC32.85■■■□□ 2.85
HMGXB3Q12766 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
HMGXB3Q12766 AC134684.3-201ENST00000641758 218 ntBASIC32.85■■■□□ 2.85
HMGXB3Q12766 TCF3P1-201ENST00000423021 1937 ntBASIC32.85■■■□□ 2.85
HMGXB3Q12766 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC32.85■■■□□ 2.85
HMGXB3Q12766 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC32.85■■■□□ 2.85
HMGXB3Q12766 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HMGXB3Q12766 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
HMGXB3Q12766 KIRREL3-AS3-201ENST00000404882 831 ntBASIC32.84■■■□□ 2.85
HMGXB3Q12766 RPS2P1-201ENST00000434010 821 ntBASIC32.84■■■□□ 2.85
HMGXB3Q12766 RBSN-204ENST00000449050 903 ntTSL 2 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 DNAJB3-202ENST00000449667 1266 ntBASIC32.84■■■□□ 2.85
HMGXB3Q12766 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HMGXB3Q12766 AC008735.5-201ENST00000623544 497 ntBASIC32.84■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms