Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.15■■□□□ 1.14
PPP4CP60510 KRT18P48-201ENST00000434763 852 ntBASIC22.15■■□□□ 1.14
PPP4CP60510 TSSC2-201ENST00000450217 709 ntBASIC22.15■■□□□ 1.14
PPP4CP60510 BX276092.5-203ENST00000456199 560 ntBASIC22.15■■□□□ 1.14
PPP4CP60510 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
PPP4CP60510 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP4CP60510 MIR3180-1-201ENST00000580374 94 ntBASIC22.15■■□□□ 1.14
PPP4CP60510 MIR3180-3-201ENST00000584616 94 ntBASIC22.15■■□□□ 1.14
PPP4CP60510 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4CP60510 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4CP60510 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4CP60510 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.15■■□□□ 1.14
PPP4CP60510 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP4CP60510 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.14■■□□□ 1.14
PPP4CP60510 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
PPP4CP60510 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4CP60510 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PPP4CP60510 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PPP4CP60510 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4CP60510 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4CP60510 AP002383.4-201ENST00000442518 975 ntBASIC22.14■■□□□ 1.13
PPP4CP60510 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.14■■□□□ 1.13
PPP4CP60510 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4CP60510 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4CP60510 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.14■■□□□ 1.13
PPP4CP60510 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.14■■□□□ 1.13
PPP4CP60510 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.14■■□□□ 1.13
PPP4CP60510 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.14■■□□□ 1.13
PPP4CP60510 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4CP60510 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4CP60510 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.14■■□□□ 1.13
PPP4CP60510 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PPP4CP60510 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP4CP60510 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PPP4CP60510 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4CP60510 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP4CP60510 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PPP4CP60510 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PPP4CP60510 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4CP60510 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4CP60510 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.13■■□□□ 1.13
PPP4CP60510 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP4CP60510 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP4CP60510 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4CP60510 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.12■■□□□ 1.13
PPP4CP60510 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 DUSP5P1-201ENST00000441325 1139 ntBASIC22.12■■□□□ 1.13
PPP4CP60510 KRT126P-201ENST00000549467 1181 ntBASIC22.12■■□□□ 1.13
PPP4CP60510 AC009065.1-201ENST00000564055 1225 ntBASIC22.12■■□□□ 1.13
PPP4CP60510 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PPP4CP60510 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP4CP60510 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PPP4CP60510 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.11■■□□□ 1.13
PPP4CP60510 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 AL163051.1-201ENST00000569214 1512 ntBASIC22.11■■□□□ 1.13
PPP4CP60510 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.11■■□□□ 1.13
PPP4CP60510 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PPP4CP60510 TSPY22P-201ENST00000427496 604 ntBASIC22.11■■□□□ 1.13
PPP4CP60510 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.11■■□□□ 1.13
PPP4CP60510 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.11■■□□□ 1.13
PPP4CP60510 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.11■■□□□ 1.13
PPP4CP60510 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP4CP60510 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PPP4CP60510 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PPP4CP60510 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4CP60510 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.1■■□□□ 1.13
PPP4CP60510 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP4CP60510 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms