Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF140P52738 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF140P52738 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF140P52738 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF140P52738 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF140P52738 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 AC104581.1-202ENST00000635932 2618 ntBASIC18.61■□□□□ 0.57
ZNF140P52738 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZNF140P52738 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF140P52738 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF140P52738 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ZNF140P52738 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF140P52738 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF140P52738 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF140P52738 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF140P52738 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF140P52738 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF140P52738 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF140P52738 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF140P52738 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.61■□□□□ 0.57
ZNF140P52738 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF140P52738 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF140P52738 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF140P52738 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF140P52738 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF140P52738 AC090164.3-201ENST00000610780 2143 ntBASIC18.61■□□□□ 0.57
ZNF140P52738 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF140P52738 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF140P52738 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ZNF140P52738 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF140P52738 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF140P52738 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF140P52738 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF140P52738 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.6■□□□□ 0.57
ZNF140P52738 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF140P52738 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ZNF140P52738 AC145285.6-201ENST00000604632 637 ntBASIC18.6■□□□□ 0.57
ZNF140P52738 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF140P52738 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF140P52738 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF140P52738 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 KRT8P50-201ENST00000562022 1438 ntBASIC18.59■□□□□ 0.57
ZNF140P52738 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF140P52738 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF140P52738 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF140P52738 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 HMGA1P5-201ENST00000412453 271 ntBASIC18.59■□□□□ 0.57
ZNF140P52738 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF140P52738 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF140P52738 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF140P52738 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF140P52738 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF140P52738 AC073912.3-201ENST00000624414 853 ntBASIC18.59■□□□□ 0.57
ZNF140P52738 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ZNF140P52738 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms