Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
NEK3P51956 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NEK3P51956 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK3P51956 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NEK3P51956 AC104417.2-201ENST00000562989 1793 ntBASIC19.29■□□□□ 0.68
NEK3P51956 LTB4R2-202ENST00000528054 3092 ntBASIC19.29■□□□□ 0.68
NEK3P51956 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.29■□□□□ 0.68
NEK3P51956 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NEK3P51956 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NEK3P51956 AC005521.1-201ENST00000393351 872 ntBASIC19.29■□□□□ 0.68
NEK3P51956 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK3P51956 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK3P51956 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.29■□□□□ 0.68
NEK3P51956 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK3P51956 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 AL390961.4-201ENST00000623958 2535 ntBASIC19.29■□□□□ 0.68
NEK3P51956 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK3P51956 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NEK3P51956 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK3P51956 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 AC090164.3-201ENST00000610780 2143 ntBASIC19.28■□□□□ 0.68
NEK3P51956 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.28■□□□□ 0.68
NEK3P51956 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
NEK3P51956 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 TMPOP1-202ENST00000424642 1267 ntBASIC19.28■□□□□ 0.68
NEK3P51956 SLC25A1P2-201ENST00000430693 912 ntBASIC19.28■□□□□ 0.68
NEK3P51956 AL137013.1-201ENST00000432946 1228 ntBASIC19.28■□□□□ 0.68
NEK3P51956 CCR12P-201ENST00000446203 998 ntBASIC19.28■□□□□ 0.68
NEK3P51956 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.28■□□□□ 0.68
NEK3P51956 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 RN7SL850P-201ENST00000579959 291 ntBASIC19.28■□□□□ 0.68
NEK3P51956 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 AC116562.4-202ENST00000641738 218 ntBASIC19.28■□□□□ 0.68
NEK3P51956 AC092865.7-201ENST00000641832 219 ntBASIC19.28■□□□□ 0.68
NEK3P51956 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK3P51956 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK3P51956 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK3P51956 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NEK3P51956 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.27■□□□□ 0.68
NEK3P51956 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 Z98044.1-201ENST00000632503 1764 ntBASIC19.27■□□□□ 0.68
NEK3P51956 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.27■□□□□ 0.68
NEK3P51956 ECEL1P2-202ENST00000465689 757 ntBASIC19.27■□□□□ 0.68
NEK3P51956 PRSS44-201ENST00000515154 1146 ntBASIC19.27■□□□□ 0.68
NEK3P51956 CKBP1-201ENST00000565489 1086 ntBASIC19.27■□□□□ 0.68
NEK3P51956 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK3P51956 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK3P51956 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.27■□□□□ 0.67
NEK3P51956 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.27■□□□□ 0.67
NEK3P51956 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.27■□□□□ 0.67
NEK3P51956 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.26■□□□□ 0.67
NEK3P51956 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK3P51956 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK3P51956 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms