Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF144AP50876 AL355355.2-201ENST00000442321 338 ntBASIC17.41■□□□□ 0.38
RNF144AP50876 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 AC026271.3-201ENST00000571884 352 ntBASIC17.41■□□□□ 0.38
RNF144AP50876 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF144AP50876 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF144AP50876 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 AC005082.1-201ENST00000413042 2259 ntBASIC17.41■□□□□ 0.38
RNF144AP50876 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF144AP50876 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF144AP50876 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF144AP50876 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 AC007613.1-201ENST00000572811 2597 ntBASIC17.4■□□□□ 0.38
RNF144AP50876 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF144AP50876 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 TSPY15P-201ENST00000457163 923 ntBASIC17.4■□□□□ 0.38
RNF144AP50876 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF144AP50876 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 AP003071.4-201ENST00000562276 1284 ntBASIC17.4■□□□□ 0.38
RNF144AP50876 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF144AP50876 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF144AP50876 WIZP1-201ENST00000531444 2299 ntBASIC17.4■□□□□ 0.38
RNF144AP50876 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF144AP50876 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF144AP50876 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF144AP50876 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF144AP50876 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RNF144AP50876 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
RNF144AP50876 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.39■□□□□ 0.38
RNF144AP50876 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF144AP50876 LETM1P2-201ENST00000597330 2178 ntBASIC17.39■□□□□ 0.37
RNF144AP50876 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF144AP50876 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RNF144AP50876 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF144AP50876 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF144AP50876 AL390955.1-201ENST00000428694 934 ntBASIC17.39■□□□□ 0.37
RNF144AP50876 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF144AP50876 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF144AP50876 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF144AP50876 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF144AP50876 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RNF144AP50876 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF144AP50876 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF144AP50876 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF144AP50876 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 AC026471.1-201ENST00000564629 3026 ntBASIC17.39■□□□□ 0.37
RNF144AP50876 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF144AP50876 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF144AP50876 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RNF144AP50876 FSCN1P1-201ENST00000568912 1481 ntBASIC17.38■□□□□ 0.37
RNF144AP50876 AL499627.1-201ENST00000569373 2188 ntBASIC17.38■□□□□ 0.37
RNF144AP50876 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms