Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.85■□□□□ 0.77
PSEN1P49768 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 AP003041.3-201ENST00000527151 707 ntBASIC19.85■□□□□ 0.77
PSEN1P49768 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.85■□□□□ 0.77
PSEN1P49768 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC19.85■□□□□ 0.77
PSEN1P49768 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.85■□□□□ 0.77
PSEN1P49768 AL390728.6-201ENST00000566446 1246 ntBASIC19.85■□□□□ 0.77
PSEN1P49768 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PSEN1P49768 AIRN-201ENST00000601203 4374 ntBASIC19.85■□□□□ 0.77
PSEN1P49768 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PSEN1P49768 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PSEN1P49768 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.85■□□□□ 0.77
PSEN1P49768 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
PSEN1P49768 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.85■□□□□ 0.77
PSEN1P49768 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PSEN1P49768 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.85■□□□□ 0.77
PSEN1P49768 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PSEN1P49768 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PSEN1P49768 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.84■□□□□ 0.77
PSEN1P49768 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 PCDHB18P-201ENST00000524813 2368 ntBASIC19.84■□□□□ 0.77
PSEN1P49768 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.84■□□□□ 0.77
PSEN1P49768 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PSEN1P49768 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 TMPOP1-202ENST00000424642 1267 ntBASIC19.84■□□□□ 0.77
PSEN1P49768 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.84■□□□□ 0.77
PSEN1P49768 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.84■□□□□ 0.77
PSEN1P49768 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.84■□□□□ 0.77
PSEN1P49768 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PSEN1P49768 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
PSEN1P49768 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PSEN1P49768 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.84■□□□□ 0.77
PSEN1P49768 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.84■□□□□ 0.77
PSEN1P49768 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSEN1P49768 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PSEN1P49768 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.83■□□□□ 0.77
PSEN1P49768 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 AC141586.3-201ENST00000562166 1838 ntBASIC19.83■□□□□ 0.77
PSEN1P49768 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PSEN1P49768 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.83■□□□□ 0.77
PSEN1P49768 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.83■□□□□ 0.77
PSEN1P49768 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PSEN1P49768 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.83■□□□□ 0.77
PSEN1P49768 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.83■□□□□ 0.77
PSEN1P49768 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
PSEN1P49768 RN7SL850P-201ENST00000579959 291 ntBASIC19.83■□□□□ 0.77
PSEN1P49768 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PSEN1P49768 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PSEN1P49768 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PSEN1P49768 KRT8P3-201ENST00000519669 1449 ntBASIC19.83■□□□□ 0.76
PSEN1P49768 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PSEN1P49768 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PSEN1P49768 FEM1AP3-201ENST00000403722 1741 ntBASIC19.82■□□□□ 0.76
PSEN1P49768 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 AL049812.1-201ENST00000432563 2267 ntBASIC19.82■□□□□ 0.76
PSEN1P49768 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.82■□□□□ 0.76
PSEN1P49768 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.82■□□□□ 0.76
PSEN1P49768 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.82■□□□□ 0.76
PSEN1P49768 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PSEN1P49768 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.82■□□□□ 0.76
PSEN1P49768 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.82■□□□□ 0.76
PSEN1P49768 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.82■□□□□ 0.76
PSEN1P49768 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.82■□□□□ 0.76
PSEN1P49768 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.82■□□□□ 0.76
PSEN1P49768 AC010203.1-204ENST00000548782 407 ntBASIC19.82■□□□□ 0.76
PSEN1P49768 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PSEN1P49768 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.82■□□□□ 0.76
PSEN1P49768 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PSEN1P49768 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.82■□□□□ 0.76
PSEN1P49768 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PSEN1P49768 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.82■□□□□ 0.76
PSEN1P49768 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms