Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLP35914 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLP35914 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLP35914 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLP35914 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HMGCLP35914 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLP35914 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 AC112777.1-201ENST00000540175 1423 ntBASIC18.61■□□□□ 0.57
HMGCLP35914 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HMGCLP35914 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 AC010203.1-204ENST00000548782 407 ntBASIC18.61■□□□□ 0.57
HMGCLP35914 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGCLP35914 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLP35914 AL499627.1-201ENST00000569373 2188 ntBASIC18.61■□□□□ 0.57
HMGCLP35914 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLP35914 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMGCLP35914 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCLP35914 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HMGCLP35914 AC073508.3-201ENST00000619697 1419 ntBASIC18.6■□□□□ 0.57
HMGCLP35914 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 TERF1P1-201ENST00000311003 1181 ntBASIC18.6■□□□□ 0.57
HMGCLP35914 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 LIN28AP1-201ENST00000429574 405 ntBASIC18.6■□□□□ 0.57
HMGCLP35914 AL137013.1-201ENST00000432946 1228 ntBASIC18.6■□□□□ 0.57
HMGCLP35914 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.6■□□□□ 0.57
HMGCLP35914 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLP35914 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 AC141257.4-201ENST00000634557 245 ntBASIC18.6■□□□□ 0.57
HMGCLP35914 AC136944.6-201ENST00000634818 245 ntBASIC18.6■□□□□ 0.57
HMGCLP35914 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
HMGCLP35914 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCLP35914 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLP35914 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLP35914 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HMGCLP35914 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
HMGCLP35914 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 AP000593.1-201ENST00000393668 712 ntBASIC18.59■□□□□ 0.57
HMGCLP35914 AC009947.2-201ENST00000444014 672 ntBASIC18.59■□□□□ 0.57
HMGCLP35914 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCLP35914 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
HMGCLP35914 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.59■□□□□ 0.57
HMGCLP35914 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCLP35914 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCLP35914 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCLP35914 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms