Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.43■□□□□ 0.86
HOXC8P31273 AC009065.1-201ENST00000564055 1225 ntBASIC20.43■□□□□ 0.86
HOXC8P31273 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC8P31273 AL592071.1-201ENST00000611956 408 ntBASIC20.43■□□□□ 0.86
HOXC8P31273 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.43■□□□□ 0.86
HOXC8P31273 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 PCDHAC2-203ENST00000615316 3011 ntBASIC20.43■□□□□ 0.86
HOXC8P31273 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC8P31273 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC8P31273 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC8P31273 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.42■□□□□ 0.86
HOXC8P31273 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC8P31273 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC8P31273 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HOXC8P31273 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXC8P31273 FOSL1P1-201ENST00000511041 816 ntBASIC20.42■□□□□ 0.86
HOXC8P31273 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXC8P31273 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXC8P31273 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.42■□□□□ 0.86
HOXC8P31273 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HOXC8P31273 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HOXC8P31273 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC8P31273 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC8P31273 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXC8P31273 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXC8P31273 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC8P31273 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC8P31273 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 AC091304.2-201ENST00000564639 760 ntBASIC20.41■□□□□ 0.86
HOXC8P31273 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC8P31273 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 IGHV3-41-201ENST00000613121 348 ntBASIC20.41■□□□□ 0.86
HOXC8P31273 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 AL031008.1-201ENST00000619963 541 ntBASIC20.41■□□□□ 0.86
HOXC8P31273 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.41■□□□□ 0.86
HOXC8P31273 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC8P31273 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC8P31273 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC8P31273 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC8P31273 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HOXC8P31273 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC8P31273 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC8P31273 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC8P31273 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC8P31273 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HOXC8P31273 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.4■□□□□ 0.86
HOXC8P31273 AC104819.1-201ENST00000504587 486 ntBASIC20.4■□□□□ 0.86
HOXC8P31273 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HOXC8P31273 AC093484.2-201ENST00000580996 2166 ntBASIC20.4■□□□□ 0.86
HOXC8P31273 AP005901.3-202ENST00000581653 237 ntBASIC20.4■□□□□ 0.86
HOXC8P31273 AL353801.3-201ENST00000609898 542 ntBASIC20.4■□□□□ 0.86
HOXC8P31273 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.4■□□□□ 0.86
HOXC8P31273 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC8P31273 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.39■□□□□ 0.86
HOXC8P31273 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXC8P31273 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HOXC8P31273 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC8P31273 AP000593.1-201ENST00000393668 712 ntBASIC20.39■□□□□ 0.85
HOXC8P31273 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
HOXC8P31273 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXC8P31273 AC009078.2-202ENST00000463353 338 ntBASIC20.39■□□□□ 0.85
HOXC8P31273 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.39■□□□□ 0.85
HOXC8P31273 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms