Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC141257.4-201ENST00000634557 245 ntBASIC17.24■□□□□ 0.35
ABCD3P28288 AC136944.6-201ENST00000634818 245 ntBASIC17.24■□□□□ 0.35
ABCD3P28288 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.24■□□□□ 0.35
ABCD3P28288 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ABCD3P28288 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ABCD3P28288 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ABCD3P28288 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCD3P28288 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.24■□□□□ 0.35
ABCD3P28288 AL357033.4-201ENST00000617703 1807 ntBASIC17.24■□□□□ 0.35
ABCD3P28288 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ABCD3P28288 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ABCD3P28288 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCD3P28288 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 MIR564-202ENST00000385049 94 ntBASIC17.23■□□□□ 0.35
ABCD3P28288 AC009947.2-201ENST00000444014 672 ntBASIC17.23■□□□□ 0.35
ABCD3P28288 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.23■□□□□ 0.35
ABCD3P28288 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCD3P28288 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.23■□□□□ 0.35
ABCD3P28288 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCD3P28288 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.23■□□□□ 0.35
ABCD3P28288 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.23■□□□□ 0.35
ABCD3P28288 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCD3P28288 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCD3P28288 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.22■□□□□ 0.35
ABCD3P28288 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.22■□□□□ 0.35
ABCD3P28288 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.22■□□□□ 0.35
ABCD3P28288 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.22■□□□□ 0.35
ABCD3P28288 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ABCD3P28288 KRT18P21-201ENST00000515767 1272 ntBASIC17.22■□□□□ 0.35
ABCD3P28288 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
ABCD3P28288 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.22■□□□□ 0.35
ABCD3P28288 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.22■□□□□ 0.35
ABCD3P28288 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.22■□□□□ 0.35
ABCD3P28288 RN7SL850P-201ENST00000579959 291 ntBASIC17.22■□□□□ 0.35
ABCD3P28288 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.22■□□□□ 0.35
ABCD3P28288 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ABCD3P28288 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.22■□□□□ 0.35
ABCD3P28288 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ABCD3P28288 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.22■□□□□ 0.35
ABCD3P28288 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ABCD3P28288 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ABCD3P28288 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
ABCD3P28288 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.21■□□□□ 0.35
ABCD3P28288 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
ABCD3P28288 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.21■□□□□ 0.35
ABCD3P28288 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.21■□□□□ 0.35
ABCD3P28288 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.21■□□□□ 0.35
ABCD3P28288 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.21■□□□□ 0.35
ABCD3P28288 BX664615.1-201ENST00000443558 458 ntBASIC17.21■□□□□ 0.35
ABCD3P28288 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.21■□□□□ 0.35
ABCD3P28288 NEK4P2-201ENST00000580004 1012 ntBASIC17.21■□□□□ 0.35
ABCD3P28288 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.21■□□□□ 0.35
ABCD3P28288 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
ABCD3P28288 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 CROCCP3-202ENST00000420820 1947 ntBASIC17.21■□□□□ 0.35
ABCD3P28288 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ABCD3P28288 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ABCD3P28288 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ABCD3P28288 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
ABCD3P28288 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms