Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC009947.2-201ENST00000444014 672 ntBASIC18.81■□□□□ 0.6
CTPS1P17812 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTPS1P17812 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.81■□□□□ 0.6
CTPS1P17812 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.81■□□□□ 0.6
CTPS1P17812 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.81■□□□□ 0.6
CTPS1P17812 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS1P17812 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS1P17812 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CTPS1P17812 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.81■□□□□ 0.6
CTPS1P17812 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS1P17812 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CTPS1P17812 AC073508.3-201ENST00000619697 1419 ntBASIC18.81■□□□□ 0.6
CTPS1P17812 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.81■□□□□ 0.6
CTPS1P17812 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS1P17812 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS1P17812 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
CTPS1P17812 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.8■□□□□ 0.6
CTPS1P17812 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.8■□□□□ 0.6
CTPS1P17812 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 AL138966.2-201ENST00000621997 464 ntBASIC18.8■□□□□ 0.6
CTPS1P17812 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 AC141257.4-201ENST00000634557 245 ntBASIC18.8■□□□□ 0.6
CTPS1P17812 AC136944.6-201ENST00000634818 245 ntBASIC18.8■□□□□ 0.6
CTPS1P17812 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
CTPS1P17812 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CTPS1P17812 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS1P17812 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS1P17812 AL357033.4-201ENST00000617703 1807 ntBASIC18.79■□□□□ 0.6
CTPS1P17812 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS1P17812 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.79■□□□□ 0.6
CTPS1P17812 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CTPS1P17812 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS1P17812 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS1P17812 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTPS1P17812 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTPS1P17812 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS1P17812 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.78■□□□□ 0.6
CTPS1P17812 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.78■□□□□ 0.6
CTPS1P17812 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTPS1P17812 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 AC020763.4-201ENST00000623414 4170 ntBASIC18.78■□□□□ 0.6
CTPS1P17812 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.78■□□□□ 0.6
CTPS1P17812 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTPS1P17812 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.78■□□□□ 0.6
CTPS1P17812 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CTPS1P17812 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.78■□□□□ 0.6
CTPS1P17812 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.78■□□□□ 0.6
CTPS1P17812 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.78■□□□□ 0.6
CTPS1P17812 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTPS1P17812 AC092865.7-201ENST00000641832 219 ntBASIC18.78■□□□□ 0.6
CTPS1P17812 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTPS1P17812 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.78■□□□□ 0.6
CTPS1P17812 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS1P17812 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CTPS1P17812 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.6
CTPS1P17812 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CTPS1P17812 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CTPS1P17812 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.77■□□□□ 0.6
CTPS1P17812 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS1P17812 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS1P17812 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms