Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ROS1P08922 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ROS1P08922 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.11■□□□□ 0.17
ROS1P08922 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.11■□□□□ 0.17
ROS1P08922 RNF126P1-202ENST00000569893 925 ntBASIC16.11■□□□□ 0.17
ROS1P08922 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.11■□□□□ 0.17
ROS1P08922 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.11■□□□□ 0.17
ROS1P08922 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ROS1P08922 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.11■□□□□ 0.17
ROS1P08922 AC111152.3-201ENST00000569699 673 ntBASIC16.11■□□□□ 0.17
ROS1P08922 MIR3652-201ENST00000579335 131 ntBASIC16.11■□□□□ 0.17
ROS1P08922 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 AL162741.1-201ENST00000565563 1558 ntBASIC16.11■□□□□ 0.17
ROS1P08922 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ROS1P08922 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.1■□□□□ 0.17
ROS1P08922 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.1■□□□□ 0.17
ROS1P08922 MIR662-201ENST00000384847 95 ntBASIC16.1■□□□□ 0.17
ROS1P08922 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ROS1P08922 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.1■□□□□ 0.17
ROS1P08922 AC024243.1-201ENST00000609234 778 ntBASIC16.1■□□□□ 0.17
ROS1P08922 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ROS1P08922 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.1■□□□□ 0.17
ROS1P08922 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
ROS1P08922 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.1■□□□□ 0.17
ROS1P08922 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.1■□□□□ 0.17
ROS1P08922 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ROS1P08922 AL121672.3-201ENST00000608644 468 ntBASIC16.1■□□□□ 0.17
ROS1P08922 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ROS1P08922 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ROS1P08922 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.09■□□□□ 0.17
ROS1P08922 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.09■□□□□ 0.17
ROS1P08922 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.09■□□□□ 0.17
ROS1P08922 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.09■□□□□ 0.17
ROS1P08922 IFNL4P1-201ENST00000607083 540 ntBASIC16.09■□□□□ 0.17
ROS1P08922 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ROS1P08922 AC016734.2-201ENST00000624325 1377 ntBASIC16.09■□□□□ 0.17
ROS1P08922 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ROS1P08922 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ROS1P08922 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.08■□□□□ 0.17
ROS1P08922 ATP5G2P1-201ENST00000433580 426 ntBASIC16.08■□□□□ 0.17
ROS1P08922 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ROS1P08922 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ROS1P08922 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.08■□□□□ 0.17
ROS1P08922 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.08■□□□□ 0.17
ROS1P08922 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.08■□□□□ 0.17
ROS1P08922 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ROS1P08922 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ROS1P08922 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ROS1P08922 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ROS1P08922 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ROS1P08922 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms