Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.24■□□□□ 0.35
THBS1P07996 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
THBS1P07996 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
THBS1P07996 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.24■□□□□ 0.35
THBS1P07996 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
THBS1P07996 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
THBS1P07996 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.24■□□□□ 0.35
THBS1P07996 AL162741.1-201ENST00000565563 1558 ntBASIC17.23■□□□□ 0.35
THBS1P07996 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
THBS1P07996 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
THBS1P07996 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS1P07996 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS1P07996 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS1P07996 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS1P07996 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS1P07996 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.23■□□□□ 0.35
THBS1P07996 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 AC073912.3-201ENST00000624414 853 ntBASIC17.23■□□□□ 0.35
THBS1P07996 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
THBS1P07996 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.23■□□□□ 0.35
THBS1P07996 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
THBS1P07996 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS1P07996 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
THBS1P07996 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.22■□□□□ 0.35
THBS1P07996 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
THBS1P07996 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS1P07996 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.22■□□□□ 0.35
THBS1P07996 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.22■□□□□ 0.35
THBS1P07996 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 CA15P1-201ENST00000481698 905 ntBASIC17.22■□□□□ 0.35
THBS1P07996 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
THBS1P07996 KRT18P41-201ENST00000518924 1277 ntBASIC17.22■□□□□ 0.35
THBS1P07996 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.22■□□□□ 0.35
THBS1P07996 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.22■□□□□ 0.35
THBS1P07996 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 AL390961.4-201ENST00000623958 2535 ntBASIC17.22■□□□□ 0.35
THBS1P07996 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
THBS1P07996 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 AL354751.1-201ENST00000412768 1863 ntBASIC17.22■□□□□ 0.35
THBS1P07996 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
THBS1P07996 AL499627.1-201ENST00000569373 2188 ntBASIC17.22■□□□□ 0.35
THBS1P07996 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.22■□□□□ 0.35
THBS1P07996 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.21■□□□□ 0.35
THBS1P07996 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.21■□□□□ 0.35
THBS1P07996 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 MFAP1P1-201ENST00000442257 1255 ntBASIC17.21■□□□□ 0.35
THBS1P07996 SNORA78-201ENST00000459373 127 ntBASIC17.21■□□□□ 0.35
THBS1P07996 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.21■□□□□ 0.35
THBS1P07996 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.21■□□□□ 0.35
THBS1P07996 AC113410.3-201ENST00000623366 203 ntBASIC17.21■□□□□ 0.35
THBS1P07996 AL049637.2-201ENST00000641778 930 ntBASIC17.21■□□□□ 0.35
THBS1P07996 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
THBS1P07996 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
THBS1P07996 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
THBS1P07996 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
THBS1P07996 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
THBS1P07996 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
THBS1P07996 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.2■□□□□ 0.34
THBS1P07996 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms