Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFAP04085 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.49■□□□□ 0.39
PDGFAP04085 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFAP04085 AC092597.1-201ENST00000487352 616 ntBASIC17.49■□□□□ 0.39
PDGFAP04085 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFAP04085 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFAP04085 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFAP04085 CR769767.2-201ENST00000622735 460 ntBASIC17.49■□□□□ 0.39
PDGFAP04085 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFAP04085 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFAP04085 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFAP04085 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
PDGFAP04085 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.49■□□□□ 0.39
PDGFAP04085 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDGFAP04085 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFAP04085 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFAP04085 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFAP04085 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.48■□□□□ 0.39
PDGFAP04085 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.48■□□□□ 0.39
PDGFAP04085 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDGFAP04085 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDGFAP04085 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.48■□□□□ 0.39
PDGFAP04085 AC005332.8-201ENST00000622750 2735 ntBASIC17.48■□□□□ 0.39
PDGFAP04085 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDGFAP04085 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDGFAP04085 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.47■□□□□ 0.39
PDGFAP04085 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PDGFAP04085 AC020907.5-201ENST00000624372 1936 ntBASIC17.47■□□□□ 0.39
PDGFAP04085 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDGFAP04085 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.47■□□□□ 0.39
PDGFAP04085 AL645929.1-201ENST00000420084 975 ntBASIC17.47■□□□□ 0.39
PDGFAP04085 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.47■□□□□ 0.39
PDGFAP04085 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.47■□□□□ 0.39
PDGFAP04085 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.47■□□□□ 0.39
PDGFAP04085 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.47■□□□□ 0.39
PDGFAP04085 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDGFAP04085 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDGFAP04085 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
PDGFAP04085 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDGFAP04085 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDGFAP04085 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PDGFAP04085 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.46■□□□□ 0.39
PDGFAP04085 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.46■□□□□ 0.39
PDGFAP04085 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.46■□□□□ 0.39
PDGFAP04085 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.46■□□□□ 0.39
PDGFAP04085 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.46■□□□□ 0.39
PDGFAP04085 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.46■□□□□ 0.39
PDGFAP04085 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDGFAP04085 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms