Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.22■□□□□ 0.83
TIMP1P01033 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.21■□□□□ 0.83
TIMP1P01033 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.21■□□□□ 0.83
TIMP1P01033 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 SCARNA2-201ENST00000458748 420 ntBASIC20.21■□□□□ 0.83
TIMP1P01033 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.21■□□□□ 0.83
TIMP1P01033 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 AL355877.3-201ENST00000622820 899 ntBASIC20.21■□□□□ 0.83
TIMP1P01033 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.21■□□□□ 0.83
TIMP1P01033 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 TEX21P-204ENST00000641479 1693 ntBASIC20.21■□□□□ 0.83
TIMP1P01033 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMP1P01033 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TIMP1P01033 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TIMP1P01033 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TIMP1P01033 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.2■□□□□ 0.82
TIMP1P01033 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TIMP1P01033 TCF3P1-201ENST00000423021 1937 ntBASIC20.2■□□□□ 0.82
TIMP1P01033 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.2■□□□□ 0.82
TIMP1P01033 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.2■□□□□ 0.82
TIMP1P01033 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.2■□□□□ 0.82
TIMP1P01033 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TIMP1P01033 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.2■□□□□ 0.82
TIMP1P01033 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.2■□□□□ 0.82
TIMP1P01033 AC116407.3-201ENST00000623905 1129 ntBASIC20.2■□□□□ 0.82
TIMP1P01033 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.2■□□□□ 0.82
TIMP1P01033 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.2■□□□□ 0.82
TIMP1P01033 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TIMP1P01033 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMP1P01033 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.2■□□□□ 0.82
TIMP1P01033 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TIMP1P01033 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.19■□□□□ 0.82
TIMP1P01033 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.19■□□□□ 0.82
TIMP1P01033 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.19■□□□□ 0.82
TIMP1P01033 RPS2P28-201ENST00000314255 741 ntBASIC20.19■□□□□ 0.82
TIMP1P01033 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 HNRNPDP1-201ENST00000439535 754 ntBASIC20.19■□□□□ 0.82
TIMP1P01033 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.19■□□□□ 0.82
TIMP1P01033 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TIMP1P01033 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 AL691403.2-201ENST00000618460 490 ntBASIC20.19■□□□□ 0.82
TIMP1P01033 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TIMP1P01033 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.19■□□□□ 0.82
TIMP1P01033 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TIMP1P01033 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.18■□□□□ 0.82
TIMP1P01033 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TIMP1P01033 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.18■□□□□ 0.82
TIMP1P01033 FGFR3P6-201ENST00000457012 610 ntBASIC20.18■□□□□ 0.82
TIMP1P01033 PGAM5P1-201ENST00000518923 814 ntBASIC20.18■□□□□ 0.82
TIMP1P01033 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.18■□□□□ 0.82
TIMP1P01033 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms