Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH8O95206 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH8O95206 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH8O95206 ZNF444P1-201ENST00000559497 298 ntBASIC18.71■□□□□ 0.59
PCDH8O95206 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH8O95206 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH8O95206 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH8O95206 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH8O95206 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH8O95206 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH8O95206 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH8O95206 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH8O95206 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH8O95206 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH8O95206 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH8O95206 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH8O95206 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH8O95206 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH8O95206 AC083849.1-201ENST00000615227 514 ntBASIC18.7■□□□□ 0.58
PCDH8O95206 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH8O95206 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH8O95206 AC005332.1-201ENST00000577698 1310 ntBASIC18.7■□□□□ 0.58
PCDH8O95206 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH8O95206 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH8O95206 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH8O95206 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH8O95206 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH8O95206 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH8O95206 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 KRT18P23-201ENST00000435622 1283 ntBASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH8O95206 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 HYMAI.1-201ENST00000620949 238 ntBASIC18.69■□□□□ 0.58
PCDH8O95206 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH8O95206 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 KRT8P32-201ENST00000512863 1461 ntBASIC18.69■□□□□ 0.58
PCDH8O95206 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH8O95206 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH8O95206 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH8O95206 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDH8O95206 SEC1P-202ENST00000473944 940 ntBASIC18.68■□□□□ 0.58
PCDH8O95206 AL136038.3-201ENST00000561909 1096 ntBASIC18.68■□□□□ 0.58
PCDH8O95206 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDH8O95206 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDH8O95206 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDH8O95206 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH8O95206 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH8O95206 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDH8O95206 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH8O95206 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH8O95206 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH8O95206 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDH8O95206 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH8O95206 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH8O95206 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms