Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 KRT8P45-201ENST00000414328 1447 ntBASIC21.02■□□□□ 0.96
ACTN4O43707 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACTN4O43707 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACTN4O43707 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.02■□□□□ 0.95
ACTN4O43707 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACTN4O43707 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.01■□□□□ 0.95
ACTN4O43707 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.01■□□□□ 0.95
ACTN4O43707 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ACTN4O43707 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.01■□□□□ 0.95
ACTN4O43707 AC096733.2-201ENST00000609937 1394 ntBASIC21.01■□□□□ 0.95
ACTN4O43707 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.01■□□□□ 0.95
ACTN4O43707 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.01■□□□□ 0.95
ACTN4O43707 AC116562.2-201ENST00000507042 360 ntBASIC21.01■□□□□ 0.95
ACTN4O43707 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.01■□□□□ 0.95
ACTN4O43707 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.01■□□□□ 0.95
ACTN4O43707 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.01■□□□□ 0.95
ACTN4O43707 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.01■□□□□ 0.95
ACTN4O43707 AC142381.4-202ENST00000563973 229 ntBASIC21.01■□□□□ 0.95
ACTN4O43707 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ACTN4O43707 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 AL135905.2-201ENST00000584934 1404 ntBASIC21.01■□□□□ 0.95
ACTN4O43707 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACTN4O43707 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21■□□□□ 0.95
ACTN4O43707 AIRN-201ENST00000601203 4374 ntBASIC21■□□□□ 0.95
ACTN4O43707 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ACTN4O43707 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21■□□□□ 0.95
ACTN4O43707 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21■□□□□ 0.95
ACTN4O43707 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
ACTN4O43707 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ACTN4O43707 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21■□□□□ 0.95
ACTN4O43707 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACTN4O43707 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21■□□□□ 0.95
ACTN4O43707 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 NOC2LP1-202ENST00000452600 2235 ntBASIC20.99■□□□□ 0.95
ACTN4O43707 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
ACTN4O43707 RPS2P55-201ENST00000397318 883 ntBASIC20.99■□□□□ 0.95
ACTN4O43707 AC107956.1-201ENST00000494359 873 ntBASIC20.99■□□□□ 0.95
ACTN4O43707 NUDT16P1-203ENST00000513809 620 ntBASIC20.99■□□□□ 0.95
ACTN4O43707 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.99■□□□□ 0.95
ACTN4O43707 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.99■□□□□ 0.95
ACTN4O43707 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.99■□□□□ 0.95
ACTN4O43707 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.99■□□□□ 0.95
ACTN4O43707 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACTN4O43707 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.98■□□□□ 0.95
ACTN4O43707 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
ACTN4O43707 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ACTN4O43707 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.98■□□□□ 0.95
ACTN4O43707 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.98■□□□□ 0.95
ACTN4O43707 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.98■□□□□ 0.95
ACTN4O43707 AC113410.3-201ENST00000623366 203 ntBASIC20.98■□□□□ 0.95
ACTN4O43707 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
ACTN4O43707 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 AC008556.1-201ENST00000610908 2040 ntBASIC20.98■□□□□ 0.95
ACTN4O43707 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms