Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.34■□□□□ 0.69
COCHO43405 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COCHO43405 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.34■□□□□ 0.69
COCHO43405 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
COCHO43405 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.34■□□□□ 0.69
COCHO43405 HLA-F-220ENST00000434407 884 ntBASIC19.34■□□□□ 0.69
COCHO43405 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.34■□□□□ 0.69
COCHO43405 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.34■□□□□ 0.69
COCHO43405 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.34■□□□□ 0.69
COCHO43405 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.34■□□□□ 0.69
COCHO43405 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COCHO43405 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COCHO43405 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
COCHO43405 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COCHO43405 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COCHO43405 SLC25A24-204ENST00000569674 2357 ntBASIC19.33■□□□□ 0.69
COCHO43405 AL391807.1-203ENST00000604392 2365 ntBASIC19.33■□□□□ 0.69
COCHO43405 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COCHO43405 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.33■□□□□ 0.69
COCHO43405 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.33■□□□□ 0.68
COCHO43405 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.33■□□□□ 0.68
COCHO43405 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.33■□□□□ 0.68
COCHO43405 AL136038.4-201ENST00000603606 1261 ntBASIC19.33■□□□□ 0.68
COCHO43405 AC093458.2-201ENST00000623150 629 ntBASIC19.33■□□□□ 0.68
COCHO43405 AC083906.6-201ENST00000641366 219 ntBASIC19.33■□□□□ 0.68
COCHO43405 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
COCHO43405 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COCHO43405 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
COCHO43405 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COCHO43405 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COCHO43405 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COCHO43405 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.33■□□□□ 0.68
COCHO43405 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.33■□□□□ 0.68
COCHO43405 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COCHO43405 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COCHO43405 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.32■□□□□ 0.68
COCHO43405 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.32■□□□□ 0.68
COCHO43405 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.32■□□□□ 0.68
COCHO43405 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.32■□□□□ 0.68
COCHO43405 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.32■□□□□ 0.68
COCHO43405 AC069148.1-201ENST00000608741 768 ntBASIC19.32■□□□□ 0.68
COCHO43405 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.32■□□□□ 0.68
COCHO43405 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COCHO43405 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.32■□□□□ 0.68
COCHO43405 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
COCHO43405 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.31■□□□□ 0.68
COCHO43405 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.31■□□□□ 0.68
COCHO43405 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.31■□□□□ 0.68
COCHO43405 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.31■□□□□ 0.68
COCHO43405 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.31■□□□□ 0.68
COCHO43405 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.31■□□□□ 0.68
COCHO43405 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COCHO43405 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COCHO43405 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms