Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
FOXN1O15353 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.33■■□□□ 1.17
FOXN1O15353 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.33■■□□□ 1.17
FOXN1O15353 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
FOXN1O15353 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.33■■□□□ 1.17
FOXN1O15353 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXN1O15353 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXN1O15353 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXN1O15353 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.33■■□□□ 1.16
FOXN1O15353 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXN1O15353 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXN1O15353 AL162741.1-201ENST00000565563 1558 ntBASIC22.33■■□□□ 1.16
FOXN1O15353 AC093525.10-201ENST00000625130 1569 ntBASIC22.33■■□□□ 1.16
FOXN1O15353 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
FOXN1O15353 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXN1O15353 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXN1O15353 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 HTR5BP-201ENST00000430851 1154 ntBASIC22.32■■□□□ 1.16
FOXN1O15353 AC098831.1-202ENST00000438821 336 ntBASIC22.32■■□□□ 1.16
FOXN1O15353 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.32■■□□□ 1.16
FOXN1O15353 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.32■■□□□ 1.16
FOXN1O15353 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXN1O15353 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.32■■□□□ 1.16
FOXN1O15353 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXN1O15353 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXN1O15353 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.32■■□□□ 1.16
FOXN1O15353 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
FOXN1O15353 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXN1O15353 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.31■■□□□ 1.16
FOXN1O15353 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 AC093484.2-201ENST00000580996 2166 ntBASIC22.31■■□□□ 1.16
FOXN1O15353 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXN1O15353 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.31■■□□□ 1.16
FOXN1O15353 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXN1O15353 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXN1O15353 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
FOXN1O15353 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FOXN1O15353 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.3■■□□□ 1.16
FOXN1O15353 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 RPS8P6-201ENST00000426177 609 ntBASIC22.3■■□□□ 1.16
FOXN1O15353 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.3■■□□□ 1.16
FOXN1O15353 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
FOXN1O15353 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
FOXN1O15353 AC104819.1-201ENST00000504587 486 ntBASIC22.3■■□□□ 1.16
FOXN1O15353 AC034232.1-201ENST00000506026 1064 ntBASIC22.3■■□□□ 1.16
FOXN1O15353 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
FOXN1O15353 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.3■■□□□ 1.16
FOXN1O15353 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.3■■□□□ 1.16
FOXN1O15353 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXN1O15353 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.3■■□□□ 1.16
FOXN1O15353 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
FOXN1O15353 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXN1O15353 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
FOXN1O15353 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXN1O15353 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
FOXN1O15353 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.29■■□□□ 1.16
FOXN1O15353 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms