Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.03■□□□□ 0.8
SPTLC1O15269 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.03■□□□□ 0.8
SPTLC1O15269 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.03■□□□□ 0.8
SPTLC1O15269 HYMAI.1-201ENST00000620949 238 ntBASIC20.03■□□□□ 0.8
SPTLC1O15269 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.03■□□□□ 0.8
SPTLC1O15269 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.03■□□□□ 0.8
SPTLC1O15269 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.02■□□□□ 0.8
SPTLC1O15269 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 STARP1-201ENST00000397973 869 ntBASIC20.02■□□□□ 0.8
SPTLC1O15269 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.02■□□□□ 0.8
SPTLC1O15269 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SPTLC1O15269 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.02■□□□□ 0.8
SPTLC1O15269 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
SPTLC1O15269 HEIH-201ENST00000623091 1652 ntBASIC20.02■□□□□ 0.8
SPTLC1O15269 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC1O15269 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPTLC1O15269 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SPTLC1O15269 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPTLC1O15269 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.02■□□□□ 0.79
SPTLC1O15269 MTMR9LP-203ENST00000426597 1545 ntBASIC20.02■□□□□ 0.79
SPTLC1O15269 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SPTLC1O15269 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPTLC1O15269 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.01■□□□□ 0.79
SPTLC1O15269 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.01■□□□□ 0.79
SPTLC1O15269 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.01■□□□□ 0.79
SPTLC1O15269 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.01■□□□□ 0.79
SPTLC1O15269 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 AC112497.1-201ENST00000624824 639 ntBASIC20.01■□□□□ 0.79
SPTLC1O15269 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.01■□□□□ 0.79
SPTLC1O15269 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPTLC1O15269 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20■□□□□ 0.79
SPTLC1O15269 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SPTLC1O15269 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SPTLC1O15269 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPTLC1O15269 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20■□□□□ 0.79
SPTLC1O15269 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20■□□□□ 0.79
SPTLC1O15269 AC112907.2-201ENST00000448639 330 ntBASIC20■□□□□ 0.79
SPTLC1O15269 AL671277.2-201ENST00000458060 996 ntBASIC20■□□□□ 0.79
SPTLC1O15269 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SPTLC1O15269 AP000550.4-202ENST00000639755 178 ntBASIC20■□□□□ 0.79
SPTLC1O15269 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20■□□□□ 0.79
SPTLC1O15269 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SPTLC1O15269 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SPTLC1O15269 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SPTLC1O15269 AL357033.4-201ENST00000617703 1807 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms