Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17■□□□□ 0.31
SMAD9O15198 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17■□□□□ 0.31
SMAD9O15198 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 AR-207ENST00000612010 3896 ntTSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 AC087499.1-201ENST00000418141 1075 ntBASIC17■□□□□ 0.31
SMAD9O15198 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17■□□□□ 0.31
SMAD9O15198 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17■□□□□ 0.31
SMAD9O15198 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 UBQLN4P1-201ENST00000461599 1801 ntBASIC17■□□□□ 0.31
SMAD9O15198 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17■□□□□ 0.31
SMAD9O15198 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD9O15198 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SMAD9O15198 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17■□□□□ 0.31
SMAD9O15198 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17■□□□□ 0.31
SMAD9O15198 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 FEM1AP3-201ENST00000403722 1741 ntBASIC16.99■□□□□ 0.31
SMAD9O15198 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 FP475955.4-201ENST00000623131 1990 ntBASIC16.99■□□□□ 0.31
SMAD9O15198 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.99■□□□□ 0.31
SMAD9O15198 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SMAD9O15198 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD9O15198 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD9O15198 CYP2D8P-201ENST00000433633 1490 ntBASIC16.99■□□□□ 0.31
SMAD9O15198 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
SMAD9O15198 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMAD9O15198 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMAD9O15198 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.98■□□□□ 0.31
SMAD9O15198 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
SMAD9O15198 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
SMAD9O15198 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.98■□□□□ 0.31
SMAD9O15198 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMAD9O15198 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMAD9O15198 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.97■□□□□ 0.31
SMAD9O15198 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMAD9O15198 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMAD9O15198 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.97■□□□□ 0.31
SMAD9O15198 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMAD9O15198 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMAD9O15198 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms