Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN4O14493 AC068587.9-201ENST00000641814 219 ntBASIC17.64■□□□□ 0.41
CLDN4O14493 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN4O14493 HEIH-201ENST00000623091 1652 ntBASIC17.64■□□□□ 0.41
CLDN4O14493 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CLDN4O14493 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN4O14493 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CLDN4O14493 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.64■□□□□ 0.41
CLDN4O14493 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN4O14493 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN4O14493 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN4O14493 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN4O14493 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN4O14493 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN4O14493 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDN4O14493 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLDN4O14493 WWOX-216ENST00000569818 525 ntBASIC17.63■□□□□ 0.41
CLDN4O14493 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN4O14493 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CLDN4O14493 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLDN4O14493 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN4O14493 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN4O14493 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CLDN4O14493 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 BX323043.1-201ENST00000641006 1765 ntBASIC17.62■□□□□ 0.41
CLDN4O14493 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.62■□□□□ 0.41
CLDN4O14493 AP000523.1-201ENST00000398242 1049 ntBASIC17.62■□□□□ 0.41
CLDN4O14493 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN4O14493 MIR4674-201ENST00000582457 87 ntBASIC17.62■□□□□ 0.41
CLDN4O14493 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 KRT8P45-201ENST00000414328 1447 ntBASIC17.62■□□□□ 0.41
CLDN4O14493 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN4O14493 AC006333.2-201ENST00000607957 2099 ntBASIC17.62■□□□□ 0.41
CLDN4O14493 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLDN4O14493 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN4O14493 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN4O14493 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 AC018445.3-201ENST00000624177 1945 ntBASIC17.61■□□□□ 0.41
CLDN4O14493 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN4O14493 AC008556.1-201ENST00000610908 2040 ntBASIC17.61■□□□□ 0.41
CLDN4O14493 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN4O14493 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN4O14493 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN4O14493 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN4O14493 CR769767.2-201ENST00000622735 460 ntBASIC17.61■□□□□ 0.41
CLDN4O14493 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN4O14493 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms