Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 KRT18P41-201ENST00000518924 1277 ntBASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 AC092119.3-201ENST00000612618 583 ntBASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 MTMR9LP-203ENST00000426597 1545 ntBASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L5A6NJ08 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 TSPY22P-201ENST00000427496 604 ntBASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 CHCHD2P8-201ENST00000429873 447 ntBASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 AC092329.2-201ENST00000598402 547 ntBASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 AC083906.6-201ENST00000641366 219 ntBASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 AL161938.1-201ENST00000569833 2180 ntBASIC16.43■□□□□ 0.22
MBD3L5A6NJ08 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 AP000593.1-201ENST00000393668 712 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 AL450487.1-201ENST00000426799 995 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 AP002383.4-201ENST00000442518 975 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 RNF126P1-202ENST00000569893 925 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 MIR3180-1-201ENST00000580374 94 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 MIR3180-3-201ENST00000584616 94 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 AL121894.2-201ENST00000602977 491 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 KRT8P50-201ENST00000562022 1438 ntBASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MBD3L5A6NJ08 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.41■□□□□ 0.22
MBD3L5A6NJ08 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms