Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 KRT18P20-201ENST00000548986 1279 ntBASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 AC024257.2-201ENST00000549699 147 ntBASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.8□□□□□ -0.04
RBFOX3A6NFN3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.79□□□□□ -0.04
RBFOX3A6NFN3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 AC012414.1-201ENST00000556676 535 ntBASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 AP001160.3-201ENST00000601484 763 ntBASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.78□□□□□ -0.04
RBFOX3A6NFN3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms