Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAI2Q9Y5P3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
RAI2Q9Y5P3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAI2Q9Y5P3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAI2Q9Y5P3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 AL109659.2-201ENST00000606809 1674 ntBASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 HMGA1P5-201ENST00000412453 271 ntBASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 UPK3BP1-201ENST00000428678 509 ntBASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 AC008556.1-201ENST00000610908 2040 ntBASIC18.95■□□□□ 0.62
RAI2Q9Y5P3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAI2Q9Y5P3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 KRT8P45-201ENST00000414328 1447 ntBASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.93■□□□□ 0.62
RAI2Q9Y5P3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 TNXA-203ENST00000507684 2038 ntBASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 MTMR9LP-203ENST00000426597 1545 ntBASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 MIR3180-5-201ENST00000583743 153 ntBASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 CR769767.2-201ENST00000622735 460 ntBASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.92■□□□□ 0.62
RAI2Q9Y5P3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms