Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDE1Q9NXR1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDE1Q9NXR1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDE1Q9NXR1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.14■□□□□ 0.49
NDE1Q9NXR1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 AC010980.2-201ENST00000587099 1412 ntBASIC18.14■□□□□ 0.49
NDE1Q9NXR1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDE1Q9NXR1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 CNN2P6-201ENST00000439038 900 ntBASIC18.13■□□□□ 0.49
NDE1Q9NXR1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 AP006587.1-201ENST00000534129 1502 ntBASIC18.13■□□□□ 0.49
NDE1Q9NXR1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDE1Q9NXR1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AC084018.2-201ENST00000613093 2607 ntBASIC18.12■□□□□ 0.49
NDE1Q9NXR1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 AC141586.5-201ENST00000624546 2050 ntBASIC18.12■□□□□ 0.49
NDE1Q9NXR1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDE1Q9NXR1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms