Protein–RNA interactions for Protein: Q9NVR0

KLHL11, Kelch-like protein 11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL11Q9NVR0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 FAM197Y1-201ENST00000421178 764 ntBASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 AC011298.2-201ENST00000617989 482 ntBASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL11Q9NVR0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 AC004951.3-201ENST00000418645 1148 ntBASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL11Q9NVR0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 FAM210CP-201ENST00000445714 574 ntBASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 TSPY15P-201ENST00000457163 923 ntBASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 AC011506.1-201ENST00000474329 610 ntBASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 AC073195.1-201ENST00000607241 877 ntBASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL11Q9NVR0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 AL499627.1-201ENST00000569373 2188 ntBASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 AL031985.4-201ENST00000642138 673 ntBASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHL11Q9NVR0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms