Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDLIM7Q9NR12 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 AC093525.10-201ENST00000625130 1569 ntBASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 AC024243.1-201ENST00000609234 778 ntBASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.98■□□□□ 0.95
PDLIM7Q9NR12 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AC106795.1-205ENST00000512851 1056 ntBASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AC091304.2-201ENST00000564639 760 ntBASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 SLC25A6P4-201ENST00000586535 553 ntBASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AL121772.3-201ENST00000610840 674 ntBASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM7Q9NR12 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 TPSP2-201ENST00000561760 610 ntBASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM7Q9NR12 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PDLIM7Q9NR12 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 AP002469.2-201ENST00000531724 424 ntBASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 AC079602.3-201ENST00000623931 403 ntBASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM7Q9NR12 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 DRAXINP1-201ENST00000437611 948 ntBASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 AP000867.3-201ENST00000524675 377 ntBASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms