Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 AC091390.4-202ENST00000476426 537 ntBASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LRTM1Q9HBL6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 AC004951.3-201ENST00000418645 1148 ntBASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 AL353807.1-201ENST00000427475 662 ntBASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 C1QBPP2-201ENST00000528754 825 ntBASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 TMEM191A-211ENST00000637163 1067 ntBASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRTM1Q9HBL6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 KRT16P1-201ENST00000399124 1418 ntBASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.03■□□□□ 0.48
LRTM1Q9HBL6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRTM1Q9HBL6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms