Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 MIR3180-5-201ENST00000583743 153 ntBASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.76■□□□□ 0.59
ZFYVE1Q9HBF4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 TNXA-203ENST00000507684 2038 ntBASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZFYVE1Q9HBF4 KRT8P45-201ENST00000414328 1447 ntBASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 CR769767.2-201ENST00000622735 460 ntBASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZFYVE1Q9HBF4 AC036111.1-201ENST00000533973 1582 ntBASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 CROCCP3-202ENST00000420820 1947 ntBASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 AL357033.4-201ENST00000617703 1807 ntBASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 AC113347.1-201ENST00000413321 391 ntBASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 LIN28AP1-201ENST00000429574 405 ntBASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 WWOX-216ENST00000569818 525 ntBASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZFYVE1Q9HBF4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
ZFYVE1Q9HBF4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms