Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 MED15P5-201ENST00000423150 992 ntBASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 AC083906.6-201ENST00000641366 219 ntBASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 AC079781.4-201ENST00000641908 219 ntBASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf49Q9H6J7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 GPX1P2-201ENST00000429271 606 ntBASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf49Q9H6J7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 MTDHP3-201ENST00000594186 672 ntBASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 AC034236.2-201ENST00000606662 1610 ntBASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.53■□□□□ 0.88
C11orf49Q9H6J7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 RBM17P3-201ENST00000417687 1192 ntBASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 IGHV3-22-201ENST00000520721 359 ntBASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 MIR3687-2-201ENST00000577708 61 ntBASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 MIR3687-1-201ENST00000614492 61 ntBASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
C11orf49Q9H6J7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.52■□□□□ 0.87
C11orf49Q9H6J7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C11orf49Q9H6J7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
C11orf49Q9H6J7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C11orf49Q9H6J7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.51■□□□□ 0.87
C11orf49Q9H6J7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms