Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 SLC25A1P2-201ENST00000430693 912 ntBASIC17.38■□□□□ 0.37
UBQLN3Q9H347 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 AC009113.1-201ENST00000570267 2443 ntBASIC17.38■□□□□ 0.37
UBQLN3Q9H347 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN3Q9H347 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 AC093525.10-201ENST00000625130 1569 ntBASIC17.37■□□□□ 0.37
UBQLN3Q9H347 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 RCN1P1-201ENST00000400413 996 ntBASIC17.37■□□□□ 0.37
UBQLN3Q9H347 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN3Q9H347 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 Z98044.1-201ENST00000632503 1764 ntBASIC17.36■□□□□ 0.37
UBQLN3Q9H347 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 AC113347.1-201ENST00000413321 391 ntBASIC17.36■□□□□ 0.37
UBQLN3Q9H347 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 CA15P1-201ENST00000481698 905 ntBASIC17.36■□□□□ 0.37
UBQLN3Q9H347 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 AC005363.2-201ENST00000618631 242 ntBASIC17.36■□□□□ 0.37
UBQLN3Q9H347 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN3Q9H347 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SLC25A3P1-201ENST00000443844 931 ntBASIC17.35■□□□□ 0.37
UBQLN3Q9H347 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms