Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF407Q9C0G0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ZNF407Q9C0G0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.83■□□□□ 0.29
ZNF407Q9C0G0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF407Q9C0G0 LINC01311-201ENST00000565162 1445 ntBASIC16.83■□□□□ 0.29
ZNF407Q9C0G0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
ZNF407Q9C0G0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF407Q9C0G0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 AL391807.1-203ENST00000604392 2365 ntBASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 AL109659.2-201ENST00000606809 1674 ntBASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 FEM1AP3-201ENST00000403722 1741 ntBASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF407Q9C0G0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 AL512353.2-201ENST00000448759 1962 ntBASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 CLEC4GP1-201ENST00000596555 870 ntBASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF407Q9C0G0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms