Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
PHACTR1Q9C0D0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 ID1-201ENST00000376105 1233 ntBASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 AL355802.2-201ENST00000402069 882 ntBASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 KRT16P5-201ENST00000455284 522 ntBASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 KRT18P41-201ENST00000518924 1277 ntBASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.02■□□□□ 0.64
PHACTR1Q9C0D0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PHACTR1Q9C0D0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PHACTR1Q9C0D0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.02■□□□□ 0.63
PHACTR1Q9C0D0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 AC093677.2-201ENST00000600169 1863 ntBASIC19.01■□□□□ 0.63
PHACTR1Q9C0D0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 AL357033.4-201ENST00000617703 1807 ntBASIC19■□□□□ 0.63
PHACTR1Q9C0D0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 AC069544.1-201ENST00000609399 999 ntBASIC19■□□□□ 0.63
PHACTR1Q9C0D0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms