Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20■□□□□ 0.79
PAAF1Q9BRP4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAAF1Q9BRP4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PAAF1Q9BRP4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20■□□□□ 0.79
PAAF1Q9BRP4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20■□□□□ 0.79
PAAF1Q9BRP4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAAF1Q9BRP4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
PAAF1Q9BRP4 AC116562.4-201ENST00000641316 2276 ntBASIC20■□□□□ 0.79
PAAF1Q9BRP4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 AC005332.7-201ENST00000614046 2005 ntBASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 ATP5G2P1-201ENST00000433580 426 ntBASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 AC012313.10-201ENST00000623509 926 ntBASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAAF1Q9BRP4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 CLEC4GP1-201ENST00000596555 870 ntBASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 AL121894.2-201ENST00000602977 491 ntBASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 AC092119.3-201ENST00000612618 583 ntBASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 KRT8P7-201ENST00000533003 1432 ntBASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 AC034236.2-201ENST00000606662 1610 ntBASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PAAF1Q9BRP4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 AC016734.2-201ENST00000624325 1377 ntBASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 KRT126P-201ENST00000549467 1181 ntBASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 RNF126P1-202ENST00000569893 925 ntBASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 AL357033.4-201ENST00000617703 1807 ntBASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 HEIH-201ENST00000623091 1652 ntBASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.97■□□□□ 0.79
PAAF1Q9BRP4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 MIR662-201ENST00000384847 95 ntBASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 MTMR9LP-203ENST00000426597 1545 ntBASIC19.96■□□□□ 0.79
PAAF1Q9BRP4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms