Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.46■■□□□ 1.03
PTPN18Q99952 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 GABARAPL3-202ENST00000624044 1851 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PTPN18Q99952 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN18Q99952 AC005104.2-201ENST00000427818 678 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.46■■□□□ 1.03
PTPN18Q99952 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PTPN18Q99952 AC093909.1-201ENST00000504731 1122 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 AC139887.3-201ENST00000568585 713 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.46■■□□□ 1.03
PTPN18Q99952 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PTPN18Q99952 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.46■■□□□ 1.03
PTPN18Q99952 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN18Q99952 AC092667.1-201ENST00000434301 2586 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.46■■□□□ 1.03
PTPN18Q99952 TEX21P-204ENST00000641479 1693 ntBASIC21.46■■□□□ 1.03
PTPN18Q99952 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN18Q99952 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 KRT8P32-201ENST00000512863 1461 ntBASIC21.45■■□□□ 1.03
PTPN18Q99952 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.45■■□□□ 1.02
PTPN18Q99952 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.45■■□□□ 1.02
PTPN18Q99952 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PTPN18Q99952 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 AC034236.2-201ENST00000606662 1610 ntBASIC21.45■■□□□ 1.02
PTPN18Q99952 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PTPN18Q99952 HNRNPDP1-201ENST00000439535 754 ntBASIC21.45■■□□□ 1.02
PTPN18Q99952 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
PTPN18Q99952 AC008608.2-201ENST00000606089 416 ntBASIC21.45■■□□□ 1.02
PTPN18Q99952 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
PTPN18Q99952 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.45■■□□□ 1.02
PTPN18Q99952 AC055717.3-201ENST00000622967 595 ntBASIC21.45■■□□□ 1.02
PTPN18Q99952 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.45■■□□□ 1.02
PTPN18Q99952 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PTPN18Q99952 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PTPN18Q99952 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTPN18Q99952 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.44■■□□□ 1.02
PTPN18Q99952 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.44■■□□□ 1.02
PTPN18Q99952 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.44■■□□□ 1.02
PTPN18Q99952 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.44■■□□□ 1.02
PTPN18Q99952 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
PTPN18Q99952 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PTPN18Q99952 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.44■■□□□ 1.02
PTPN18Q99952 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.44■■□□□ 1.02
PTPN18Q99952 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 FAM215A-202ENST00000632077 792 ntBASIC21.44■■□□□ 1.02
PTPN18Q99952 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTPN18Q99952 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.44■■□□□ 1.02
PTPN18Q99952 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PTPN18Q99952 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PTPN18Q99952 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PTPN18Q99952 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
PTPN18Q99952 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.43■■□□□ 1.02
PTPN18Q99952 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.43■■□□□ 1.02
PTPN18Q99952 PGAM5P1-201ENST00000518923 814 ntBASIC21.43■■□□□ 1.02
PTPN18Q99952 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.43■■□□□ 1.02
PTPN18Q99952 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.43■■□□□ 1.02
PTPN18Q99952 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.43■■□□□ 1.02
PTPN18Q99952 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.43■■□□□ 1.02
PTPN18Q99952 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.43■■□□□ 1.02
PTPN18Q99952 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 KRT89P-201ENST00000620027 1478 ntBASIC21.43■■□□□ 1.02
PTPN18Q99952 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.43■■□□□ 1.02
PTPN18Q99952 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTPN18Q99952 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms